Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THYM rs4728786 chr7:76135948 A/G 0.000249 119 39.5 46.23 28.43 KM Plot
THYM rs4728788 chr7:76136719 A/G 0.000249 119 39.5 46.23 28.43 KM Plot
THYM rs4742743 chr9:98515578 G/A 4.98E-5 118 38.33 51.38 32.7 KM Plot
THYM rs4742744 chr9:98515721 T/A 2.71E-6 117 38.58 51.38 32.7 KM Plot
THYM rs4743275 chr9:98512029 T/C 4.98E-5 118 38.33 51.38 32.7 KM Plot
THYM rs4743293 chr9:98525304 A/C 0.000292 115 35.07 54.9 35.33 KM Plot
THYM rs4750243 chr10:12657517 G/C 0.000182 115 42.25 40.73 28.43 KM Plot
THYM rs4766324 chr12:5100411 A/G 9.15E-7 119 46.07 38.13 11.58 KM Plot
THYM rs4774434 chr15:62565050 G/A 6.04E-5 114 41.77 35.67 29.82 KM Plot
THYM rs4799838 chr18:33597530 T/C 0.000136 119 49.4 35 51.23 KM Plot
THYM rs4799839 chr18:33597531 T/C 0.000136 119 49.4 35 51.23 KM Plot
THYM rs4802513 chr19:49357656 T/A 2.21E-5 114 37.63 48.18 14.95 KM Plot
THYM rs4818884 chr21:45580327 C/T 0.000116 118 38.58 51.23 28.43 KM Plot
THYM rs4818885 chr21:45580513 G/A 0.000116 118 38.58 51.23 28.43 KM Plot
THYM rs4818886 chr21:45589727 C/T 0.000142 116 38.58 51.23 28.43 KM Plot